Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900715.1_cds_XP_016450740.1_45162
CDS Infomation

[gene=LOC107775516] [db_xref=GeneID:107775516] [protein=CDPK-related kinase 3] [protein_id=XP_016450740.1] [location=join(46116..46643,50132..50262,50452..50493,50578..50686,50779..50857,52050..52346,52799..52908,54199..54306,54478..54540,54866..55033,55127..55261)] [gbkey=CDS]
Sequence

ATGGGCCAGTGTTACGGCAAGACCATCCCCACCGTTCGGGACTCTGATGGAACAACCATC
ACCTCCGTCGCCGGCGACGCCGATCACCCGTTACCGGCCACTCCGGTCAACAACGTTCCC
TCAGTCAAAAACACACCTGCTCGATCTTCTGCTAACAGTCCTTGGCCAAGCCCTTACCCT
CACGGTGTAGTAGCAGGTGTGACTCCTTCTCCCGCCAGGTCCACGCCTAGAAGGTTCTTC
AAACGACCTTTTCCTCCGCCGTCTCCGGCCAAGCACATTAAGGCATCGCTCGCCAGGCGA
TTTGGCCATGCGAAGCCCCCGACGGAGGGGCCAATTCCCGAGGATGGTACAGCTGAGCCT
GATCAGTCGCTTGATAAGAATTTTGGATACAACAAGAACTTCGGCGCTAAGTATGAATTG
GGGAAAGAAATCGGCCGGGGGCATTTTGGTCATACCTGTCACGCCAAGGGCAAGAAAGGA
GACCTTAAGGACCTCCCTCTTGCTGTCAAAATCATCTCCAAAGCTAAGATGACAACAGCA
ATATCCATCGAAGATGTGCGCAGAGAAGTGAAGATTTTAAAGGCTCTTTCATGCCATAAA
CATCTTGTCAAATTTCACGATGCTTGTGAGGACGCAAATAATGTGTACATAGTAATGGAA
TTGTGTGAAGGAGGGGAATTACTTGACAGAATATTGTCAAGAGGTGGTAAATATTCAGAG
GATGATGCCAAACTTATTGTTGTCCAAATTCTAAGTGTAGTTGCATTTTGTCATCTCCAA
GGTGTGGTCCATCGTGACTTGAAGCCTGAGAATTTCCTTTTCACCTCCAGAAATGAAGAT
GCTGACATGAAGCTTATCGATTTTGGGCTTTCTGACTTTATTAGACCAGATGAAAGACTT
AATGATATTGTGGGAAGTGCATATTATGTGGCACCAGAAGTCCTCCACAGATCTTACAGC
TTGGAAGCAGATATCTGGAGTATTGGGGTGATTACCTACATTTTGTTATGTGGAAGCAGA
CCATTCTGGGCAAGGACAGAATCTGGAATTTTTCGTGCAGTATTGAGAGCTGACCCTAAC
TTTGAAGACTTGCCTTGGCCTTCTGTGTCCCCTGAGGCCAAGGACTTTGTAAAGAGGCTT
TTAAATAAGGACTATCGTAAGAGGATGACTGCTGCTCAGGCTTTGACGCATCCATGGTTG
CGCAGCGAAAGCCATCCTATTCCTTTGGATATATTGGTCTATAAGTTGGTGAAGTCATAT
TTGCATGCTACACCTCTCAAACGTGCAGCACTAAAGGCTCTTTCTAAAGCTTTAACGGAA
GATGAACTGGTTTACCTTAGAGCGCAATTCATGCTTATGGAACCTAGCAAAGATGGACGT
GTTTCTCTTGAAAACTTCAAAATGGCTCTTATAGGAAATGCTACTGATGCTATGAAGGAG
TCAAGGGTGCCAGATATTCTGAATGCGATGGCAACACTGTCATATAGGAAGCTGGACTTT
GAAGAATTTTGTGCTGCTGCAATCAGCACATATCAGTTGGAGGCCCTTGAGGGATGGGAG
CAGATTGCATCAGTGGCATTTGAACATTTTGAGCGAGAGGGGAATCGGCCTATTTCAGTG
GAGGAATTGGCTAGGGAGTTGAATGTAGGCCCAACTGCTCATTCCATTCTCAGAGATTGG
ATAAGAAGTGATGGAAAACTTAGTTTACTTGGATATACCAAATTTTTGCATGGTGTGACT
CTTCGTAGTGCACATATGAGACATCATTAG

Peptide Sequence

PEP ID

XP_016450740.1
PEP Infomation

PREDICTED: CDPK-related kinase 3 [Nicotiana tabacum]
Sequence

MGQCYGKTIPTVRDSDGTTITSVAGDADHPLPATPVNNVPSVKNTPARSSANSPWPSPYP
HGVVAGVTPSPARSTPRRFFKRPFPPPSPAKHIKASLARRFGHAKPPTEGPIPEDGTAEP
DQSLDKNFGYNKNFGAKYELGKEIGRGHFGHTCHAKGKKGDLKDLPLAVKIISKAKMTTA
ISIEDVRREVKILKALSCHKHLVKFHDACEDANNVYIVMELCEGGELLDRILSRGGKYSE
DDAKLIVVQILSVVAFCHLQGVVHRDLKPENFLFTSRNEDADMKLIDFGLSDFIRPDERL
NDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPN
FEDLPWPSVSPEAKDFVKRLLNKDYRKRMTAAQALTHPWLRSESHPIPLDILVYKLVKSY
LHATPLKRAALKALSKALTEDELVYLRAQFMLMEPSKDGRVSLENFKMALIGNATDAMKE
SRVPDILNAMATLSYRKLDFEEFCAAAISTYQLEALEGWEQIASVAFEHFEREGNRPISV
EELARELNVGPTAHSILRDWIRSDGKLSLLGYTKFLHGVTLRSAHMRHH

Transcript Sequence

Gene sequence data has not been registered.